Compounding Pharmacies: What to Do When Your Medication Isn't Available

Compounding Pharmacies: What to Do When Your Medication Isn't Available
Alan Gervasi 17 Dec 2025 0 Comments

When your doctor prescribes a medication and the pharmacy says it’s out of stock-again-you’re not alone. In 2025, over 350 drugs in the U.S. remain in short supply, from antibiotics to heart medications, hormone therapies, and even basic pain relievers. For many, waiting weeks isn’t an option. That’s where compounding pharmacies come in. They don’t just fill prescriptions. They rebuild them.

What Exactly Is a Compounding Pharmacy?

A compounding pharmacy isn’t your local CVS or Walgreens. It’s a specialized lab where pharmacists mix ingredients from scratch to make medications that aren’t available commercially. Think of it like a chef cooking a meal for someone with food allergies-except instead of gluten or nuts, they’re removing dyes, preservatives, or fillers that trigger reactions. Or instead of pills, they make liquids, creams, or even lollipops for kids who can’t swallow tablets.

These pharmacies follow strict standards set by the U.S. Pharmacopeia (USP <795> and <797>) and are often accredited by the Pharmacy Compounding Accreditation Board (PCAB). Only about 1,200 of the 7,500 compounding pharmacies in the U.S. have this extra certification. It’s not just about making something- it’s about making it safe.

Why Do Drug Shortages Happen?

Drug shortages aren’t random. They happen because manufacturing is concentrated. A single factory in India or China might supply 80% of a drug used across the country. If that plant shuts down for inspection, has a quality issue, or faces a supply chain delay, the entire U.S. runs out. The FDA tracks over 300 active shortages each year. Some drugs are old, cheap, and low-profit-so manufacturers stop making them. Others are complex, like sterile injectables, which require clean rooms and precise controls.

When a drug is on shortage, your doctor might try to switch you to another brand. But what if that brand has the same filler you’re allergic to? Or what if you’re a senior who can’t swallow the new pill size? That’s where compounding steps in.

When Compounding Makes the Difference

Here’s what compounding pharmacies can do that regular pharmacies can’t:

  • Remove allergens like lactose, gluten, or FD&C dyes for patients with sensitivities
  • Change a pill into a liquid, gel, or transdermal cream for people who can’t swallow
  • Adjust dosage strength-say, from 50mg to 12.5mg-for kids or elderly patients
  • Create flavored versions (bubblegum, cherry, mint) so children actually take their medicine
  • Combine multiple medications into one dose to reduce pill burden
A 2023 study found that 85% of patients with allergies to commercial drug ingredients stuck with their treatment after switching to a compounded version. For kids, adherence jumped 73% when bitter-tasting meds were turned into flavored syrups. For older adults with swallowing issues, creams or troches (lozenges) made all the difference.

One parent in Melbourne shared how their 5-year-old with epilepsy had been vomiting every dose of oral medication. After switching to a compounded transdermal gel applied to the inner thigh, seizures dropped by 40% and vomiting stopped. The pharmacy worked with the neurologist to find the right concentration and delivery method.

Who Uses Compounded Medications Most?

Not everyone needs it-but certain groups rely on it:

  • Children (12% of compounded scripts): Can’t swallow pills? Compounded liquids or chewables fix that.
  • Elderly patients (28%): Swallowing problems, multiple meds, or sensitivity to fillers make compounding essential.
  • Allergy-sensitive individuals (22%): Reactions to dyes, preservatives, or gluten are common-compounding removes them.
  • Chronic pain patients (22%): Topical creams for joint pain or nerve pain avoid stomach side effects of pills.
  • Hormone therapy users (28%): Custom doses of estrogen, testosterone, or thyroid meds that aren’t commercially available.
These aren’t fringe cases. They’re real people who can’t get well with mass-produced drugs.

A child receiving a glowing flavored lollipop instead of a bitter pill, surrounded by floating medicinal shapes.

What Compounding Can’t Do

It’s important to know the limits. Compounding pharmacies can’t make:

  • Biologics (like insulin or monoclonal antibodies)
  • Complex IV chemotherapy drugs requiring sterile manufacturing beyond their scope
  • Drugs that are patented and legally protected
  • Medications that are already available in FDA-approved form
A 2023 survey found that about 15% of compounded prescriptions could have been replaced with an existing FDA-approved drug. That’s unnecessary risk. Compounding should be a last resort-not a first choice-when no approved alternative works.

How to Get a Compounded Prescription

It’s not as simple as walking in and asking. Here’s the process:

  1. Your doctor identifies a problem: the drug is unavailable, or you react to it.
  2. Your doctor writes a prescription with a clear medical reason: "Patient allergic to dye X; requires sugar-free liquid form."
  3. You take the script to a compounding pharmacy (ask your regular pharmacist for a referral).
  4. The pharmacist reviews the formula, checks ingredient availability, and confirms it’s legally allowed.
  5. Preparation takes 24-72 hours. Sterile compounds (like injections) take longer.
  6. You pick it up. Some pharmacies ship nationwide.
Make sure the pharmacy is PCAB-accredited. You can search for them at pcab.org. Ask if they do stability testing and batch record keeping. These aren’t optional-they’re safety checks.

Cost and Insurance: The Big Hurdle

Here’s the tough part: insurance doesn’t always cover compounded meds. About 45% of patients pay out-of-pocket. A standard prescription might cost $15 with insurance. A compounded version? $80-$200, depending on complexity.

Some insurers will cover it if your doctor submits a letter of medical necessity. Others require prior authorization. A few state Medicaid programs have special programs for compounding. Always ask the pharmacy to check your coverage before they start making it.

One patient in Florida spent $1,200 on a compounded thyroid medication before her insurer finally approved it-after her doctor proved the commercial versions caused severe rashes. It took three months. But she got her life back.

An elderly person applying glowing cream to their skin, with fading pain symbols and shattered pill bottles in the background.

Real Stories, Real Impact

On Reddit’s r/Pharmacy, a pharmacist shared a case: a man on oral finasteride for hair loss had sexual side effects in 32% of users. His doctor switched him to a compounded topical version. Side effects dropped to 8%. He kept using it for years.

Another case: a 78-year-old woman with chronic pain couldn’t tolerate NSAIDs because of stomach ulcers. Her pharmacist made a compounded gel with ketoprofen and lidocaine. She applied it twice a day. Her pain score dropped from 8/10 to 3/10. No GI issues. No pills.

These aren’t outliers. They’re the norm for people who’ve been let down by the system.

What’s Changing in 2025?

The compounding industry is evolving. New digital tools reduce errors by 37%. Stability testing now extends shelf life by 25-40%. The FDA updated its guidance in 2022 to clarify when compounding is acceptable during shortages. PCAB added new requirements in January 2023 for documentation and testing.

Demand is rising. The U.S. compounding market is projected to hit $15.8 billion by 2027. More hospitals are building in-house compounding labs. Independent pharmacies are investing in clean rooms and training.

But the core hasn’t changed: it’s still about solving problems that big pharma won’t touch.

Final Thoughts

Compounding pharmacies aren’t magic. They’re not cheaper. They’re not faster. But when the system fails you-when your medication is gone, or it makes you sick-they’re the only thing standing between you and no treatment at all.

If you’re stuck because a drug is unavailable, don’t just wait. Talk to your doctor. Ask if compounding is an option. Find a reputable pharmacy. Bring your medical history. Be persistent.

You’re not asking for something unusual. You’re asking for the right medicine. And sometimes, that’s not on the shelf. It’s being made just for you.

Are compounded medications safe?

Yes-when they’re made by accredited pharmacies following USP standards. PCAB-accredited compounding pharmacies are held to the same quality standards as major drug manufacturers. They test ingredients, document every batch, and use clean rooms for sterile products. But not all compounding pharmacies are equal. Always choose one with PCAB accreditation and ask about their testing protocols.

Can I get compounded medications without a prescription?

No. Federal law requires a valid prescription from a licensed provider for any compounded medication. Even if a pharmacy offers "over-the-counter" compounded products, those are illegal and unsafe. Always work with your doctor and a licensed pharmacy.

How long does it take to get a compounded medication?

Most take 24 to 72 hours. Simple non-sterile formulas (like creams or liquids) can be ready in a day. Sterile preparations, like injections or IV solutions, take longer-sometimes up to 5 days-because they require extra testing and validation. Always plan ahead, especially if you’re running low.

Why don’t more pharmacies compound medications?

It’s expensive and time-consuming. Compounding requires special equipment, clean rooms, trained staff, and rigorous documentation. Most retail pharmacies focus on volume, not customization. A standard prescription takes 5 minutes. A compounded one can take 30-45 minutes. Fewer than 15% of U.S. pharmacies offer compounding services at all.

Is compounding covered by Medicare or private insurance?

Sometimes. Many insurance plans don’t automatically cover compounded drugs. You’ll need your doctor to submit a letter of medical necessity. Some Medicare Part D plans cover them if they’re deemed essential and no alternative exists. Always check with your insurer before the pharmacy starts making it. About half of patients pay out-of-pocket.